BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030H12SP1|AL429308
(933 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig543 1744 0.0
>3x_Contig543
Length = 2970
Score = 1744 bits (873), Expect = 0.0
Identities = 913/932 (97%), Gaps = 1/932 (0%)
Strand = Plus / Plus
Query: 1 gatccatttacgggagactaattggccatatgatgcgcttatccagctcgtatatccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 gatccatttacgggagactaattggccatatgatgcgcttatccagctcgtatatccaag 69
Query: 61 gtaattgacatgaagatagtttttcctggtaataattagcatcaacattgcaacatagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gtaattgacatgaagatagtttttcctggtaataattagcatcaacattgcaacatagaa 129
Query: 121 agataatatttttactggccataacagtwatttctgagatttcgacaactcccattgtgt 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 130 agataatatttttactggccataacagtaatttctgagatttcgacaactcccattgtgt 189
Query: 181 cgtaatggttgthattaaaccgacaagtaccgctgttttgaagagtaaacccctggcgaa 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cgtaatggttgtaattaaaccgacaagtaccgctgttttgaagagtaaacccctggcgaa 249
Query: 241 attattaaacctgctcttgcataccccactgaatatccgatggtaagttaaacgagaatc 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 250 attattaaacctgctcttgcataccccactgaatatccgatggtaagtaaaacgagaatc 309
Query: 301 acgcagttgcggtgcaacsgttcctaaactctgcacgttagacatcaatgaaaacaaacc 360
|||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct: 310 acgcagttgcggtgcaaccggtcctaaactctgcacgtaagacatcaatgaaaacaaacc 369
Query: 361 aatcaaagatgaacacaggtaaaagtwcagcctgtwtagcwatwagctgagttattttag 420
|||||||||||||||||||||||||| |||||||| |||| || |||||||| |||||||
Sbjct: 370 aatcaaagatgaacacaggtaaaagtacagcctgtatagcaataagctgagtaattttag 429
Query: 421 atgcttaahacagacaaaggtcaattggactttaggacaatcaattaccttccgagttac 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atgcttaaaacagacaaaggtcaattggactttaggacaatcaattaccttccgagttac 489
Query: 481 ttatattatttatttgtatatcatctcaagcattttaagttcttaacaggttgtgatcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttatattatttatttgtatatcatctcaagcattttaagttcttaacaggttgtgatcta 549
Query: 541 gagatcaggcgtcataaaamaattagatattcgggtaaccctcttatgccaatgtcatag 600
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gagatcaggcgtcataaaaaaattagatattcgggtaaccctcttatgccaatgtcatag 609
Query: 601 ttgatttgcatggtaactcgnaactaaagacaatcacctccttgtcagtgaggtcagtct 660
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ttgatttgcatggtaactcgaaactaaagacaatcacctccttgtcagtgaggtcagtct 669
Query: 661 caacatatagacgctaaacgcgaacctgatgatatcgtaaacagttgttacatgtaaata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 caacatatagacgctaaacgcgaacctgatgatatcgtaaacagttgttacatgtaaata 729
Query: 721 agtaaatcaactaaatatgtgtyatattctctttctctttcttgtaacaatggtctcgtg 780
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 730 agtaaatcaactaaatatgtgtcatattctctttctctttcttgtaacaatggtctcgtg 789
Query: 781 tc-actttaacgcttaaaagttgatattcttgtccaaaagatatatacaaatatatacaa 839
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 tcaactttaacgcttaaaagttgatattcttgtccaaaagatatatacaaatatatacaa 849
Query: 840 ggtcactcatagagtactgaaaatattagaatgatttgcgtcgccactttcatgaccaat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 ggtcactcatagagtactgaaaatattagaatgatttgcgtcgccactttcatgaccaat 909
Query: 900 gttagttcttctatgacagcacagggactgcc 931
|| ||| |||||||||||||||||| ||||||
Sbjct: 910 gtaagtacttctatgacagcacaggtactgcc 941
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6108
Number of Sequences: 1807
Number of extensions: 6108
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)